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新疆大学生命科学与技术学院
Published:2025
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[1]张蓉蓉,范满良,卢思敏,等.甜瓜锚定蛋白ANK家族基因生物信息学鉴定分析[J].新疆大学学报(自然科学版中英文),2025,42(01):55-65.
[1]张蓉蓉,范满良,卢思敏,等.甜瓜锚定蛋白ANK家族基因生物信息学鉴定分析[J].新疆大学学报(自然科学版中英文),2025,42(01):55-65. DOI: 10.13568/j.cnki.651094.651316.2024.02.20.0001.
DOI:10.13568/j.cnki.651094.651316.2024.02.20.0001.
ANK(Ankyrin)锚定蛋白家族编码ANK结构域,植物中ANK家族基因参与调控植物对生物与非生物胁迫的响应.基于甜瓜全基因组及转录组测序数据,对甜瓜中ANK家族基因进行鉴定,分析其空间表达模式及胁迫响应表达模式.共鉴定出78个ANK基因,分为11个亚族;系统进化树分析将甜瓜ANK成员分为7大亚簇,种内8对ANK基因存在共线性关系,5个ANK基因与拟南芥、水稻、黄瓜存在种间共线性关系.CmANK家族基因在不同组织差异表达,不同胁迫下表达亦有所不同.CmANK30在非生物和生物胁迫下均呈现明显的上调表达,表明该基因积极参与逆境胁迫响应调控.
The ANK anchored protein family encodes the ANK domain
ANK family genes in plants are involved in regulating plant responses to biotic and abiotic stresses
with overexpression of ANK genes enhancing plant stress resistance. Based on the whole genome and transcriptome sequencing data of melon
the structures
phylogenetic relationship
genome localizations and expression profiles of 78 ankyrin repeat genes identified in melon(CmANK).Domain composition analysis showed that CmANK proteins formed 11 subfamilies. The phylogenetic tree analysis classified melon ANK members into 7 major subclusters
with 8 pairs of collinearity within the species and a linear relationship with 5 genes among Arabidopsis
rice and cucumber. The CmANK family genes are differentially expressed in different tissues and vary in expression under different stresses. The expression profiles analysis of melon ANK genes under biotic and abiotic stress conditions revealed that melon ANK gene
CmANK30
showed significant up-regulation of expression in response to all stresses
which meant this gene played an important role in stress response regulation.
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